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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs2265799 chr9:96540772 T/A PLEKHA7 chr11:16798864-17035990:- -1.1 -7.56 6.36E-10 Box Plot
ACC rs2265801 chr9:96529943 T/A PLEKHA7 chr11:16798864-17035990:- -1.1 -7.56 6.36E-10 Box Plot
ACC rs2265802 chr9:96529679 C/T PLEKHA7 chr11:16798864-17035990:- -1.1 -7.56 6.36E-10 Box Plot
ACC rs2265804 chr9:96528409 C/T PLEKHA7 chr11:16798864-17035990:- -1.1 -7.56 6.36E-10 Box Plot
ACC rs2265805 chr9:96520319 C/T PLEKHA7 chr11:16798864-17035990:- -1.11 -7.56 6.27E-10 Box Plot
ACC rs2270872 chr8:132967863 G/A PRHOXNB chr13:28552243-28562774:- 0.54 7.71 3.68E-10 Box Plot
ACC rs2272551 chr14:22690209 A/C FRMD4A chr10:13685706-14504141:- -1.38 -7.69 3.9E-10 Box Plot
ACC rs2276624 chr2:86737334 A/G PRHOXNB chr13:28552243-28562774:- 0.74 10.41 2.53E-14 Box Plot
ACC rs2280062 chr3:168645499 T/C OR5V1 chr6:29323007-29399744:- 0.64 7.7 3.83E-10 Box Plot
ACC rs2303445 chr8:80954789 G/C PRHOXNB chr13:28552243-28562774:- 0.72 10.2 5.25E-14 Box Plot
ACC rs2311767 chr15:99214986 T/C PRHOXNB chr13:28552243-28562774:- -0.6 -7.68 4.1E-10 Box Plot
ACC rs2373616 chr7:149658974 A/G OR5V1 chr6:29323007-29399744:- -0.64 -8.05 1.05E-10 Box Plot
ACC rs2381341 chr9:5933188 C/T DSC1 chr18:28709199-28742819:- -0.9 -8.49 2.12E-11 Box Plot
ACC rs2414515 chr15:57895002 G/C PRHOXNB chr13:28552243-28562774:- 0.7 9.08 2.58E-12 Box Plot
ACC rs2443646 chr2:130953371 G/T LOC150776 chr2:132250386-132279149:+ 0.57 7.59 5.59E-10 Box Plot